Rhizoplaca porterii

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Leavitt S, Fernández-Mendoza F, Pérez-Ortega S, Sohrabi M, Divakar P, Lumbsch H, Clair L (2013) DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including five new species. MycoKeys 7 : 1–22, doi. Versioned wiki page: 2013-05-09, version 34459, https://species-id.net/w/index.php?title=Rhizoplaca_porterii&oldid=34459 , contributors (alphabetical order): Pensoft Publishers.

Citation formats to copy and paste

BibTeX:

@article{Leavitt2013MycoKeys7,
author = {Leavitt, Steven D. AND Fernández-Mendoza, Fernando AND Pérez-Ortega, Sergio AND Sohrabi, Mohammad AND Divakar, Pradeep K. AND Lumbsch, H. Thorsten AND Clair, Larry L. St.},
journal = {MycoKeys},
publisher = {Pensoft Publishers},
title = {DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including five new species},
year = {2013},
volume = {7},
issue = {},
pages = {1--22},
doi = {10.3897/mycokeys.7.4508},
url = {http://www.pensoft.net/journals/mycokeys/article/4508/abstract},
note = {Versioned wiki page: 2013-05-09, version 34459, https://species-id.net/w/index.php?title=Rhizoplaca_porterii&oldid=34459 , contributors (alphabetical order): Pensoft Publishers.}

}

RIS/ Endnote:

TY - JOUR
T1 - DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including five new species
A1 - Leavitt S
A1 - Fernández-Mendoza F
A1 - Pérez-Ortega S
A1 - Sohrabi M
A1 - Divakar P
A1 - Lumbsch H
A1 - Clair L
Y1 - 2013
JF - MycoKeys
JA -
VL - 7
IS -
UR - http://dx.doi.org/10.3897/mycokeys.7.4508
SP - 1
EP - 22
PB - Pensoft Publishers
M1 - Versioned wiki page: 2013-05-09, version 34459, https://species-id.net/w/index.php?title=Rhizoplaca_porterii&oldid=34459 , contributors (alphabetical order): Pensoft Publishers.

M3 - doi:10.3897/mycokeys.7.4508

Wikipedia/ Citizendium:

<ref name="Leavitt2013MycoKeys7">{{Citation
| author = Leavitt S, Fernández-Mendoza F, Pérez-Ortega S, Sohrabi M, Divakar P, Lumbsch H, Clair L
| title = DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including five new species
| journal = MycoKeys
| year = 2013
| volume = 7
| issue =
| pages = 1--22
| pmid =
| publisher = Pensoft Publishers
| doi = 10.3897/mycokeys.7.4508
| url = http://www.pensoft.net/journals/mycokeys/article/4508/abstract
| pmc =
| accessdate = 2024-12-23

}} Versioned wiki page: 2013-05-09, version 34459, https://species-id.net/w/index.php?title=Rhizoplaca_porterii&oldid=34459 , contributors (alphabetical order): Pensoft Publishers.</ref>

See also the citation download page at the journal.


Taxonavigation

Ordo: Lecanorales
Familia: Lecanoraceae
Genus: Rhizoplaca

Name

Rhizoplaca porterii S. Leavitt, F. Fernández-Mendoza, Lumbsch, Sohrabi & L. St. Clair sp. nov.Wikispecies linkPensoft Profile

Type

USA, Utah, Wayne County, Thousand Lakes Mountain, vicinity of ‘Flat Top’, near summit, 38.4432°N, 111.4703°W, on basalt, 3400 m alt., October 1997, Lyndon D. Porter BRY-C55096 (holotype BRY).

Description

Morphologically similar to Rhizoplaca melanophthalma sensu stricto, but consists of specimens recovered within ‘clade IVd’ in Leavitt et al. (2011a)[1], which is supported as a lineage distinct from all other populations according to coalescent-based genetic analysis of multiple genetic loci. This species is also characterized by the absence of a group I intron in the nuclear SSU rDNA at the 1516 position (Gutiérrez et al. 2007[2]), which is present in all other species within the Rhizoplaca melanophthalma species-complex. The mean genetic distances among ITS haplotypes was estimated to be 0.002 ± 0.002.
Chemistry– Usnic acid (major); usually with psoromic (major), constipatic (minor), dehydroconstipatic (minor), dehydroprotocetraric (minor), subpsoromic (minor), demethylpsoromic (minor), and 2’-O-demethylsubpsoromic (minor or trace) acids.

Reference phylogeny

Leavitt et al. 2011a[1] (fig. 5, ‘clade IVd’).

Reference sequences

GenBank Nos. HM577327 (ITS), HM57710 (IGS), HM577461 (MCM 7), and HM576971 (β-tubulin).
Phylogenetic notes: A monophyletic lineage in both concatenated multilocus gene tree with weak statistical support (ML bootstrap < 50%; posterior probability < 0.5), and with strong statistical support in the ITS gene topology (ML bootstrap = 94%, this study); and strong speciation probability inferred from multiple loci (BPP speciation probability ≥ 0.97). Rhizoplaca porterii belongs to a closely related, and well-supported, monophyletic lineage including Rhizoplaca occulta, Rhizoplaca parilis, Rhizoplaca porterii, and the obligatory vagrant species Rhizoplaca haydenii and Rhizoplaca idahoensis.

Ecology and distribution

This species usually occurs on exposed calcium-poor rock (e.g. basalt, granite, schist), but sometimes on calcium rich sandstone and limestone. Its habitat ranges from pinyon-juniper woodland into montane coniferous forests and lower alpine tundra. This taxon iscurrently known only from the western USA (Idaho and Utah).

Etymology

The new taxon is named in honor ofDr. Lyndon D. Porter, whose research on Rhizoplaca melanophthalma proved invaluable to the present work.

Specimens examined

See supplementary file 1.

Original Description

  • Leavitt, S; Fernández-Mendoza, F; Pérez-Ortega, S; Sohrabi, M; Divakar, P; Lumbsch, H; Clair, L; 2013: DNA barcode identification of lichen-forming fungal species in the Rhizoplaca melanophthalma species-complex (Lecanorales, Lecanoraceae), including five new species MycoKeys, 7: 1-22. doi

Other References

  1. 1.0 1.1 Leavitt S, Fankhauser J, Leavitt D, Porter L, Johnson L, St. C (2011a) Complex patterns of speciation in cosmopolitan ‘‘rock posy’’ lichens – Discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota). Molecular Phylogenetics and Evolution 59: 587-602. doi: 10.1016/j.ympev.2011.03.020
  2. Gutiérrez G, Blanco O, Divakar P, Lumbsch H, Crespo A (2007) Patterns of group i intron presence in nuclear SSU rDNA of the lichen family Parmeliaceae. Journal of Molecular Evolution 64: 181-195. doi: 10.1007/s00239-005-0313-y